PPDB

The Plant Proteome Database

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AT3G44320.1   nitrilase 3

Lab Annot. NIT3 (NITRILASE 3)
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G44310.1 11Arabidopsis thaliana034683921500 (1202)_
AT3G44310.3 11Arabidopsis thaliana034683921414 (1116)_
AT3G44300.1 11Arabidopsis thaliana03408392119 (89)_
Os02g42350.1 7Oryza sativa9E-16032265810 (0)_
Os02g42330.1 7Oryza sativa8E-15731864782 (2)_
Os02g42330.2 7Oryza sativa8E-11823666782 (2)_
Zm00001eb185550_P001 agpv5Zea mays2E-16032765800 (0)_
v1_GRMZM2G111225_P01 4a53Zea mays2E-16032765800 (0)_
v1_GRMZM2G111225_P02 4a53Zea mays2E-16032765800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CN_hydrolase(1)
TargetP: Cytoplasm (Class 4 C0.385; M0.053; S0.122; _0.671)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 346 aa (-cTP 294)
Molecular Weight 38.02 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1614Detail       Natural Senescence leaf [A. thaliana]  
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (M&Skoog))
16502469(cell suspension-Cd-up)
16055689(Glutathionylated suspension cell)
15276459(trichomes)
19114538(guard cells Arabidopsis leaf)
20516081(tagged-26S proteasome-affinity)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help