PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G44220.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22200.1 11Arabidopsis thaliana5E-10521072830 (0)_
AT3G52470.1 11Arabidopsis thaliana7E-8120855711 (1)S
AT3G11660.1 11Arabidopsis thaliana2E-7920955701 (1)M
Os12g06260.1 7Oryza sativa7E-6321046660 (0)_
Os11g05860.1 7Oryza sativa2E-6220846644 (4)_
Os04g58860.1 7Oryza sativa3E-5721743630 (0)_
Zm00001eb198910_P002 agpv5Zea mays2E-5621146660 (0)_
Zm00001eb198910_P003 agpv5Zea mays2E-5621146660 (0)_
Zm00001eb198910_P001 agpv5Zea mays2E-5621146660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1) Syndecan(1) T7SS_ESX1_EccB(1)
TargetP: Cytoplasm (Class 3 C0.051; M0.340; S0.080; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 206 aa (-cTP 149)
Molecular Weight 23.25 kDA(-cTP )
PI 7.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help