PPDB

The Plant Proteome Database

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AT3G43980.1   Ribosomal protein S14p/S29e family protein

Lab Annot.
Mapman: 29.2.1.2.1.29 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S29
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33865.1 11Arabidopsis thaliana4E-36561001004 (4)M
AT3G44010.1 11Arabidopsis thaliana4E-36561001004 (4)M
AT3G44010.2 11Arabidopsis thaliana4E-36561001000 (0)M
Os03g56241.1 7Oryza sativa7E-335691940 (0)_
Os11g41610.1 7Oryza sativa7E-335691940 (0)_
Os12g32380.1 7Oryza sativa5E-325490940 (0)_
v1_GRMZM2G165208_P01 4a53Zea mays4E-335689923 (3)C
v1_GRMZM2G165619_P03 4a53Zea mays9E-335689923 (3)C
GRMZM2G165619_P03 3.21Zea mays9E-335689924 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_S14(1)
TargetP: Mitochondria (Class 5 C0.330; M0.395; S0.058; _0.388)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 56 aa (-cTP 12)
Molecular Weight 6.43 kDA(-cTP )
PI 10.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1495Detail       leaf [A. thaliana] wild-type
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
2239Detail       seedlings [A. thaliana] total tissue gfs9
2243Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help