PPDB

The Plant Proteome Database

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AT3G43720.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. Protease inhibitor/seed storage/LTP protein
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G43720.2 11Arabidopsis thaliana3E-13119398987 (7)S
AT2G27130.1 11Arabidopsis thaliana1E-2410045660 (0)S
AT3G22600.1 11Arabidopsis thaliana3E-1715934520 (0)S
Os05g41030.1 7Oryza sativa2E-2212345590 (0)S
Os01g59870.1 7Oryza sativa1E-2111145620 (0)S
Os03g20760.1 7Oryza sativa3E-1811340560 (0)S
GRMZM2G379035_P01 3.21Zea mays3E-2010844567 (7)S
v1_GRMZM2G379035_P01 4a53Zea mays3E-2010844566 (6)S
Zm00001eb369130_P001 agpv5Zea mays3E-2010844560 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hydrophob_seed(1) LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 3 C0.144; M0.052; S0.732; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 193 aa (-cTP 140)
Molecular Weight 19.18 kDA(-cTP )
PI 4.51(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help