PPDB

 The Plant Proteome Database

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AT3G43610.1   Spc97 / Spc98 family of spindle pole body (SBP) component
Lab Annot.
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G43610.2 11Arabidopsis thaliana0120899990 (0)C
AT3G43610.3 11Arabidopsis thaliana0120796960 (0)C
AT5G06680.1 11Arabidopsis thaliana5E-1828327471 (1)_
Os04g47906.2 7Oryza sativa1E-6125244680 (0)_
Os02g32340.1 7Oryza sativa4E-1638223420 (0)_
Os12g41290.1 7Oryza sativa2E-1538223410 (0)_
v1_GRMZM2G318956_P01 4a53Zea mays1E-10849439610 (0)_
GRMZM2G318956_P01 3.21Zea mays1E-10849439610 (0)_
Zm00001eb073760_P001 agpv5Zea mays7E-10849439610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GCP_C_terminal(1) GCP_N_terminal(2)
TargetP: Chloroplast (Class 2 C0.825; M0.043; S0.003; _0.117)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1207 aa (-cTP 1156)
Molecular Weight 137.26 kDA(-cTP 131.80)
PI 6.17(-cTP 6.14)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2112Detail       leaf [A. thaliana] Stroma stromawt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help