PPDB

PPDB	The Plant Proteome Database

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AT3G43430.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G20885.1 11 Arabidopsis thaliana 9E-81 175 70 82 0 (0) S
AT3G61460.1 11 Arabidopsis thaliana 1E-20 151 34 50 0 (0) S
AT5G41400.1 11 Arabidopsis thaliana 5E-17 107 35 53 0 (0) S
Os02g45710.1 7 Oryza sativa 9E-20 102 43 56 0 (0) S
Os04g49000.1 7 Oryza sativa 3E-19 88 44 60 0 (0) S
Os06g34530.1 7 Oryza sativa 2E-13 147 28 44 0 (0) _
GRMZM2G397684_P01 3.21 Zea mays 2E-18 88 40 59 0 (0) S
v1_GRMZM2G397684_P01 4a53 Zea mays 2E-18 88 40 59 0 (0) S
Zm00001eb428450_P001 agpv5 Zea mays 2E-18 88 40 59 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) DUF1644(2) FANCL_C(1) Herpes_pp85(1) PHD(1) Prok-RING_1(2) Prok-R
TargetP:	Secreted (Class 5 C0.125; M0.014; S0.247; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	167 aa (-cTP 112)
Molecular Weight	19.00 kDA(-cTP )
PI	4.78(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data