PPDB

The Plant Proteome Database

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AT3G43270.1   Plant invertase/pectin methylesterase inhibitor superfamily

Lab Annot. pectinesterase
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33220.1 11Arabidopsis thaliana0526637818 (16)S
AT4G33220.2 11Arabidopsis thaliana040468810 (0)_
AT3G05620.1 11Arabidopsis thaliana6E-16046451670 (0)S
Os08g34900.1 7Oryza sativa2E-17750350660 (0)S
Os07g47830.1 7Oryza sativa3E-15246850640 (0)S
Os01g21034.1 7Oryza sativa7E-150425526718 (18)_
v1_GRMZM2G175499_P01 4a53Zea mays2E-17850151680 (0)S
Zm00001eb177120_P001 agpv5Zea mays2E-17850151680 (0)S
GRMZM2G175499_P01 3.21Zea mays2E-17850151680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 1 C0.005; M0.061; S0.979; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 527 aa (-cTP 505)
Molecular Weight 57.64 kDA(-cTP )
PI 8.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1703Detail        [A. thaliana] cGep
1749Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help