PPDB

PPDB	The Plant Proteome Database

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AT3G43180.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45560.1 11 Arabidopsis thaliana 6E-48 197 50 59 0 (0) _
AT3G45580.1 11 Arabidopsis thaliana 4E-36 114 61 73 0 (0) _
AT3G43750.1 11 Arabidopsis thaliana 9E-36 110 60 73 0 (0) S
Os11g01240.1 7 Oryza sativa 2E-08 83 33 50 0 (0) S
Os12g01230.1 7 Oryza sativa 1E-07 55 40 60 0 (0) S
GRMZM2G141244_P01 3.21 Zea mays 2E-12 66 46 63 0 (0) C
v1_GRMZM2G141244_P01 4a53 Zea mays 2E-12 66 46 63 0 (0) C
Zm00001eb194870_P001 agpv5 Zea mays 2E-10 122 28 51 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_4(1) zf-rbx1(1) zf-RING_11(1) zf-RING_2(2) zf
TargetP:	Cytoplasm (Class 1 C0.036; M0.112; S0.070; _0.943)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	191 aa (-cTP 172)
Molecular Weight	21.00 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data