PPDB

PPDB	The Plant Proteome Database

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AT3G42860.1 zinc knuckle (CCHC-type) family protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G36020.1 11 Arabidopsis thaliana 7E-18 124 39 53 21 (8) _
AT4G36020.3 11 Arabidopsis thaliana 7E-18 124 39 53 0 (0) _
AT4G36020.2 11 Arabidopsis thaliana 1E-16 137 38 50 0 (0) _
Os03g57260.2 7 Oryza sativa 7E-57 221 46 61 0 (0) _
Os03g57260.1 7 Oryza sativa 8E-34 108 57 70 0 (0) _
Os05g02040.1 7 Oryza sativa 2E-14 92 43 56 0 (0) _
GRMZM2G069218_P01 3.21 Zea mays 2E-54 298 42 53 0 (0) _
Zm00001eb059980_P001 agpv5 Zea mays 2E-54 298 42 53 0 (0) _
v1_GRMZM2G069218_P01 4a53 Zea mays 7E-14 126 42 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CLIP1_ZNF(4) Rhodanese_C(4) zf-CCHC(4) zf-CCHC_2(4) zf-CCHC_3(4) zf-CCHC_4(4) zf
TargetP:	Cytoplasm (Class 3 C0.141; M0.076; S0.089; _0.661)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	372 aa (-cTP 305)
Molecular Weight	39.91 kDA(-cTP )
PI	8.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data