PPDB

PPDB	The Plant Proteome Database

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AT3G42830.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.3.4 protein.degradation.ubiquitin.E3.SCF.RBX

Curated Location

TAIR curated location: ubiquitin ligase complex11019805

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G20570.1 11 Arabidopsis thaliana 3E-65 118 84 89 16 (10) _
AT5G20570.3 11 Arabidopsis thaliana 5E-60 136 72 77 16 (10) _
AT5G20570.2 11 Arabidopsis thaliana 2E-59 142 70 74 16 (10) _
Os02g47870.1 7 Oryza sativa 3E-62 111 81 87 0 (0) _
Os01g01700.1 7 Oryza sativa 9E-60 92 92 95 3 (3) C
Os03g19059.1 7 Oryza sativa 7E-14 87 34 55 0 (0) _
Zm00001eb126700_P001 agpv5 Zea mays 9E-61 122 77 85 0 (0) _
GRMZM2G057150_P02 3.21 Zea mays 9E-61 122 77 85 16 (8) _
GRMZM2G057150_P01 3.21 Zea mays 9E-61 122 77 85 16 (8) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(2) zf-rbx1(1) zf-R
TargetP:	Cytoplasm (Class 5 C0.563; M0.013; S0.231; _0.646)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	115 aa (-cTP 95)
Molecular Weight	13.00 kDA(-cTP )
PI	6.17(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data