PPDB

PPDB	The Plant Proteome Database

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AT3G42790.1 alfin-like 3

Lab Annot.

Mapman: 27.3.2 RNA.regulation of transcription.Alfin-like

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G20510.1 11 Arabidopsis thaliana 3E-126 259 74 86 0 (0) _
AT2G02470.2 11 Arabidopsis thaliana 6E-106 240 69 82 1 (0) _
AT2G02470.1 11 Arabidopsis thaliana 9E-106 247 68 78 1 (0) _
Os04g36730.1 7 Oryza sativa 3E-107 255 58 73 0 (0) _
Os05g34640.1 7 Oryza sativa 9E-107 258 63 77 0 (0) _
Os02g35600.1 7 Oryza sativa 6E-106 243 66 80 3 (3) _
GRMZM2G038066_P01 3.21 Zea mays 6E-117 243 66 80 0 (0) _
Zm00001eb327240_P002 agpv5 Zea mays 6E-117 243 66 80 0 (0) _
v1_GRMZM2G038066_P01 4a53 Zea mays 6E-117 243 66 80 6 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alfin(1) C1_1(1) C1_2(2) PHD(1) PPP4R2(1) YqfQ(1) zf-H2C2_2(2) zf-RING_2(1)
TargetP:	Cytoplasm (Class 2 C0.080; M0.196; S0.064; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	250 aa (-cTP 226)
Molecular Weight	28.21 kDA(-cTP )
PI	5.04(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1622	Detail								[A. thaliana]		m48

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data