PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G42660.1 transducin family protein / WD-40 repeat family protein

Lab Annot.

transducin protein / WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G23430.1 11 Arabidopsis thaliana 2E-16 236 28 44 0 (0) M
AT5G23430.2 11 Arabidopsis thaliana 2E-16 236 28 44 0 (0) M
AT5G23430.3 11 Arabidopsis thaliana 2E-16 236 28 44 0 (0) M
Os09g06560.1 7 Oryza sativa 0 992 51 67 0 (0) S
Os10g35200.1 7 Oryza sativa 1E-16 195 27 47 0 (0) _
Os03g51550.1 7 Oryza sativa 9E-16 294 26 45 2 (2) C
GRMZM2G179424_P01 3.21 Zea mays 0 977 51 69 2 (2) M
v1_GRMZM2G179424_P01 4a53 Zea mays 0 977 51 69 4 (4) M
Zm00001eb308160_P003 agpv5 Zea mays 0 977 51 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(6) eIF2A(3) Ge1_WD40(3) Mcl1_mid(1) Nbas_N(4) PD40(2) WD40(6)
TargetP:	Cytoplasm (Class 5 C0.095; M0.215; S0.035; _0.369)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	953 aa (-cTP 887)
Molecular Weight	104.85 kDA(-cTP )
PI	5.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data