PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G42550.1   Eukaryotic aspartyl protease family protein

Lab Annot. aspartic protease
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22850.1 11Arabidopsis thaliana6E-9044039550 (0)S
AT2G36670.2 11Arabidopsis thaliana2E-7447134490 (0)S
AT2G36670.1 11Arabidopsis thaliana4E-7247634490 (0)S
Os02g27360.1 7Oryza sativa1E-3941727430 (0)M
Os01g56930.1 7Oryza sativa2E-3720239580 (0)S
Os04g26790.1 7Oryza sativa9E-3241228420 (0)S
Zm00001eb160500_P003 agpv5Zea mays1E-4345127440 (0)S
GRMZM2G133029_P03 3.21Zea mays5E-4323038570 (0)_
v1_GRMZM2G133029_P03 4a53Zea mays5E-4323038572 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Asp(2) TAXi_C(1) TAXi_N(2)
TargetP: Secreted (Class 1 C0.020; M0.043; S0.866; _0.054)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 430 aa (-cTP 413)
Molecular Weight 47.88 kDA(-cTP )
PI 6.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help