PPDB

The Plant Proteome Database

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AT3G42150.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G42150.3 11Arabidopsis thaliana2E-691001001000 (0)S
AT3G42150.2 11Arabidopsis thaliana2E-691001001000 (0)S
AT1G21930.1 11Arabidopsis thaliana4E-6410095971 (1)_
Os12g29670.1 7Oryza sativa3E-408175851 (1)_
Zm00001eb318220_P001 agpv5Zea mays7E-398967820 (0)_
GRMZM5G854301_P01 3.21Zea mays7E-398967826 (6)_
GRMZM5G854301_P02 3.21Zea mays3E-338464786 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: B277(1) UPF0126(1)
TargetP: Secreted (Class 5 C0.039; M0.040; S0.487; _0.438)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 100 aa (-cTP 73)
Molecular Weight 10.73 kDA(-cTP )
PI 5.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help