PPDB

PPDB	The Plant Proteome Database

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AT3G33530.1 Transducin family protein / WD-40 repeat family protein

Lab Annot.

Transducin protein / WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G33530.2 11 Arabidopsis thaliana 0 1360 98 98 2 (2) C
AT3G33530.3 11 Arabidopsis thaliana 0 1386 95 96 2 (2) C
AT3G33530.4 11 Arabidopsis thaliana 0 1345 97 98 0 (0) C
Os02g04440.2 7 Oryza sativa 0 1355 55 69 0 (0) C
Os02g04440.3 7 Oryza sativa 0 751 66 79 0 (0) M
Os02g04440.4 7 Oryza sativa 0 738 67 79 0 (0) _
v1_GRMZM2G399858_P02 4a53 Zea mays 0 1344 56 69 1 (1) C
GRMZM2G399858_P02 3.21 Zea mays 0 1344 56 69 2 (0) C
Zm00001eb231770_P001 agpv5 Zea mays 0 1344 56 69 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(5) Herpes_UL47(1) TPR_16(2) WD40(1)
TargetP:	Chloroplast (Class 4 C0.820; M0.018; S0.004; _0.444)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1345 aa (-cTP 1248)
Molecular Weight	146.90 kDA(-cTP 136.85)
PI	5.91(-cTP 5.92)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1415	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.1	clpr2-1
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data