PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G32980.1   Peroxidase superfamily protein

Lab Annot. peroxidase 32 (PER32) (P32) (PRXR3)
Mapman: 26.12 misc.peroxidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49120.1 11Arabidopsis thaliana03428994297 (200)S
AT3G49110.1 11Arabidopsis thaliana0342899343 (25)S
AT4G08770.1 11Arabidopsis thaliana033278877 (7)S
Os03g13200.1 7Oryza sativa3E-11730855680 (0)S
Os10g02040.1 7Oryza sativa6E-10630752674 (4)S
Os03g13180.1 7Oryza sativa6E-10430751660 (0)S
v1_GRMZM2G116846_P01 4a53Zea mays2E-11630855684 (4)S
GRMZM2G116846_P01 3.21Zea mays2E-11630855680 (0)S
Zm00001eb009940_P001 agpv5Zea mays2E-11630855680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: peroxidase(1)
TargetP: Secreted (Class 4 C0.064; M0.143; S0.356; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 304)
Molecular Weight 38.85 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1468Detail       leaf [A. thaliana] co-IP GST stroma clpc1 x clps (rep. 2)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
15539469(vacuole)
17293592(total seedlings û light and dark grown)
17432890(leaf total membranes)
18998720(SA-induced secreted proteome (cell culture))
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21325567(root-proteome (wt & det3))
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help