PPDB

PPDB	The Plant Proteome Database

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AT3G30460.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G30460.2 11 Arabidopsis thaliana 9E-108 147 100 100 0 (0) _
AT3G02340.1 11 Arabidopsis thaliana 2E-18 124 40 54 0 (0) _
AT3G02340.2 11 Arabidopsis thaliana 2E-18 124 40 54 0 (0) _
Os02g49550.1 7 Oryza sativa 4E-14 69 50 57 0 (0) _
Os08g38060.1 7 Oryza sativa 5E-14 86 46 55 0 (0) C
Os09g26400.1 7 Oryza sativa 7E-14 69 42 60 0 (0) M
v1_GRMZM2G140160_P01 4a53 Zea mays 4E-14 69 42 60 0 (0) M
Zm00001eb099970_P001 agpv5 Zea mays 4E-14 69 42 60 0 (0) M
GRMZM2G140160_P01 3.21 Zea mays 4E-14 69 42 60 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1)
TargetP:	Cytoplasm (Class 1 C0.079; M0.075; S0.049; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	147 aa (-cTP 60)
Molecular Weight	16.94 kDA(-cTP )
PI	4.57(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data