PPDB

PPDB	The Plant Proteome Database

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AT3G30390.1 Transmembrane amino acid transporter family protein

Lab Annot.

Mapman: 34.3 transport.amino acids

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G30390.3 11 Arabidopsis thaliana 0 460 100 100 0 (0) _
AT3G30390.2 11 Arabidopsis thaliana 0 460 100 100 3 (3) _
AT5G38820.2 11 Arabidopsis thaliana 0 435 79 88 0 (0) _
Os06g42720.1 7 Oryza sativa 0 438 65 81 0 (0) _
Os02g49510.1 7 Oryza sativa 0 450 64 79 0 (0) _
Os02g09810.2 7 Oryza sativa 0 447 62 78 0 (0) _
v1_GRMZM2G150406_P01 4a53 Zea mays 0 426 67 81 0 (0) _
GRMZM2G150406_P01 3.21 Zea mays 0 426 67 81 0 (0) _
Zm00001eb380520_P002 agpv5 Zea mays 0 426 67 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aa_trans(1) Trp_Tyr_perm(2)
TargetP:	Cytoplasm (Class 3 C0.087; M0.238; S0.024; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction:	11 TMs
Aramemnon:	11 TMs
TAT position:
Length	460 aa (-cTP 364)
Molecular Weight	49.52 kDA(-cTP )
PI	6.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1615	Detail								Natural Senescence leaf [A. thaliana]
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17151019(vacuole - suspension cell)
19334764(plasma membrane (cell culture))
21325567(root-proteome (wt & det3))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data