PPDB

The Plant Proteome Database

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AT3G30390.1   Transmembrane amino acid transporter family protein

Lab Annot.
Mapman: 34.3 transport.amino acids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G30390.3 11Arabidopsis thaliana04601001000 (0)_
AT3G30390.2 11Arabidopsis thaliana04601001003 (3)_
AT5G38820.2 11Arabidopsis thaliana043579880 (0)_
Os06g42720.1 7Oryza sativa043865810 (0)_
Os02g49510.1 7Oryza sativa045064790 (0)_
Os02g09810.2 7Oryza sativa044762780 (0)_
v1_GRMZM2G150406_P01 4a53Zea mays042667810 (0)_
GRMZM2G150406_P01 3.21Zea mays042667810 (0)_
Zm00001eb380520_P002 agpv5Zea mays042667810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aa_trans(1) Trp_Tyr_perm(2)
TargetP: Cytoplasm (Class 3 C0.087; M0.238; S0.024; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 11 TMs
TAT position:
Length 460 aa (-cTP 364)
Molecular Weight 49.52 kDA(-cTP )
PI 6.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1615Detail       Natural Senescence leaf [A. thaliana]  
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17151019(vacuole - suspension cell)
19334764(plasma membrane (cell culture))
21325567(root-proteome (wt & det3))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help