PPDB

PPDB	The Plant Proteome Database

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AT3G29270.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29270.2 11 Arabidopsis thaliana 0 263 100 100 0 (0) _
AT1G69330.1 11 Arabidopsis thaliana 3E-88 283 47 63 0 (0) _
AT1G74370.1 11 Arabidopsis thaliana 9E-81 269 49 61 0 (0) _
Os03g31320.1 7 Oryza sativa 2E-107 266 60 71 0 (0) _
Os03g31320.2 7 Oryza sativa 2E-107 266 60 71 0 (0) _
Os03g11260.1 7 Oryza sativa 1E-102 265 60 72 0 (0) C
Zm00001eb400420_P001 agpv5 Zea mays 4E-107 259 59 72 0 (0) C
GRMZM2G113295_P01 3.21 Zea mays 4E-107 259 59 72 0 (0) C
v1_GRMZM2G113295_P01 4a53 Zea mays 4E-107 259 59 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FYVE(1) Prok-RING_4(2) zf-C3HC4(2) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(1) zf-
TargetP:	Cytoplasm (Class 3 C0.040; M0.209; S0.116; _0.789)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	263 aa (-cTP 250)
Molecular Weight	30.06 kDA(-cTP )
PI	8.34(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data