PPDB

PPDB	The Plant Proteome Database

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AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G29760.1 11 Arabidopsis thaliana 5E-139 607 35 57 1 (0) C
AT1G08070.1 11 Arabidopsis thaliana 8E-136 606 38 57 0 (0) C
AT5G15300.1 11 Arabidopsis thaliana 5E-128 556 35 58 0 (0) _
Os12g38880.1 7 Oryza sativa 0 473 52 72 0 (0) S
Os01g68610.1 7 Oryza sativa 2E-131 503 43 61 0 (0) M
Os09g38310.1 7 Oryza sativa 1E-124 615 33 55 0 (0) M
Zm00001eb037450_P001 agpv5 Zea mays 0 602 48 66 0 (0) M
GRMZM2G077320_P01 3.21 Zea mays 0 602 48 66 0 (0) C
v1_GRMZM2G077320_P01 4a53 Zea mays 0 602 48 66 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) DYW_deaminase(1) PPR(13) PPR_1(12) PPR_2(12) PPR_3(11) PPR_long(4) TPR_
TargetP:	Mitochondria (Class 4 C0.192; M0.481; S0.014; _0.232)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	600 aa (-cTP 572)
Molecular Weight	67.34 kDA(-cTP )
PI	6.61(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data