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AT3G29200.1 chorismate mutase 1

Lab Annot.

chorismate mutase 1 (CM1)
Mapman: 13.1.6.2.1 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine.chorismate mutase

Curated Location

plastid stroma (Pubmed: 23198870 )

TAIR curated location: cytosol & plastid8224252,9291097

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G69370.1 11 Arabidopsis thaliana 2E-130 265 68 80 1 (0) C
AT5G10870.1 11 Arabidopsis thaliana 1E-91 269 50 70 2 (0) _
Os01g55870.1 7 Oryza sativa 3E-120 264 69 80 21 (21) C
Os12g38900.1 7 Oryza sativa 2E-103 265 56 73 0 (0) _
Os02g08410.1 7 Oryza sativa 6E-78 256 46 65 1 (1) _
Zm00001eb152250_P001 agpv5 Zea mays 1E-132 284 65 76 0 (0) C
GRMZM2G028369_P01 3.21 Zea mays 1E-132 284 65 76 67 (58) C
v1_GRMZM2G028369_P01 4a53 Zea mays 1E-132 284 65 76 50 (50) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nucleoporin_C(2)
TargetP:	Chloroplast (Class 1 C0.958; M0.055; S0.006; _0.034)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	340 aa (-cTP 282) (-lTP 274)
Molecular Weight	38.24 kDA(-cTP 31.97)(-lTP 31.24)
PI	5.65(-cTP 5.17)(-lTP 5.107)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1455	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1458	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 1)
1460	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 3)
1461	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 1)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2304	Detail								[A. thaliana]		Clp C1 WT
2316	Detail								leaf [A. thaliana]	PG plastoglobule
2318	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data