PPDB

The Plant Proteome Database

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AT3G29170.1   transmembrane protein (DUF872)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G29170.2 11Arabidopsis thaliana3E-841211001000 (0)_
AT2G19350.1 11Arabidopsis thaliana1E-179145600 (0)_
AT4G29850.1 11Arabidopsis thaliana4E-179044600 (0)_
Os12g03500.2 7Oryza sativa1E-3512365730 (0)C
Os12g03500.1 7Oryza sativa2E-3112061710 (0)C
Os11g03760.1 7Oryza sativa1E-129056670 (0)_
Zm00001eb020420_P001 agpv5Zea mays8E-3412164780 (0)_
GRMZM2G042881_P01 3.21Zea mays8E-3412164781 (1)_
v1_GRMZM2G042881_P01 4a53Zea mays8E-3412164781 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ABC2_membrane_3(1) DUF202(2) DUF872(1)
TargetP: Cytoplasm (Class 2 C0.009; M0.202; S0.051; _0.943)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 121 aa (-cTP 113)
Molecular Weight 13.76 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help