PPDB

PPDB	The Plant Proteome Database

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AT3G28870.1 paired amphipathic helix SIN3-like protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G24260.1 11 Arabidopsis thaliana 1E-50 119 69 80 0 (0) C
AT1G20960.2 11 Arabidopsis thaliana 7E-24 52 90 90 119 (90) M
AT1G20960.1 11 Arabidopsis thaliana 7E-24 52 90 90 121 (92) M
Os03g53220.1 7 Oryza sativa 9E-11 48 60 75 0 (0) _
Os02g01740.1 7 Oryza sativa 5E-10 48 60 72 31 (31) M
Os02g01880.1 7 Oryza sativa 1E-08 48 56 68 0 (0) _
GRMZM2G026991_P01 3.21 Zea mays 4E-11 48 60 77 32 (28) _
Zm00001eb328850_P001 agpv5 Zea mays 4E-11 48 60 77 0 (0) _
v1_GRMZM2G026991_P01 4a53 Zea mays 4E-11 48 60 77 49 (49) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ku_PK_bind(2) NuA4(2) Sec63(2) SICA_alpha(1) Sin3_corepress(2) YbaB_DNA_bd(1)
TargetP:	Cytoplasm (Class 2 C0.075; M0.173; S0.028; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	355 aa (-cTP 352)
Molecular Weight	40.90 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data