PPDB

 The Plant Proteome Database

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AT3G28857.1   basic helix-loop-helix (bHLH) DNA-binding family protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39860.1 11Arabidopsis thaliana2E-448187930 (0)C
AT5G15160.1 11Arabidopsis thaliana3E-337570890 (0)C
AT1G26945.1 11Arabidopsis thaliana5E-327576880 (0)C
Os04g54900.1 7Oryza sativa3E-247659770 (0)C
Os10g26460.1 7Oryza sativa4E-247857790 (0)C
Os10g26410.1 7Oryza sativa3E-239250750 (0)C
GRMZM2G042101_P01 3.21Zea mays3E-259153720 (0)C
v1_GRMZM2G042101_P01 4a53Zea mays3E-259153720 (0)C
Zm00001eb372510_P001 agpv5Zea mays7E-249151740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF948(1) HLH(2)
TargetP: Mitochondria (Class 5 C0.388; M0.393; S0.022; _0.193)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 92 aa (-cTP 81)
Molecular Weight 10.70 kDA(-cTP )
PI 7.95(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help