PPDB

The Plant Proteome Database

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AT3G28790.1   transmembrane protein%2C putative (DUF1216)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G28830.1 11Arabidopsis thaliana6E-8129053711 (1)S
AT3G28840.1 11Arabidopsis thaliana4E-4619148680 (0)S
AT3G28780.1 11Arabidopsis thaliana3E-4517846660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1216(2) Muted(3)
TargetP: Secreted (Class 2 C0.010; M0.039; S0.726; _0.119)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 608 aa (-cTP 553)
Molecular Weight 62.77 kDA(-cTP )
PI 9.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1933Detail       leaf [A. thaliana] chloroplast wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19253305(phosphoproteins (etiolated seedling))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help