PPDB

PPDB	The Plant Proteome Database

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AT3G28660.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G28640.1 11 Arabidopsis thaliana 0 504 95 98 1 (1) M
AT1G59720.1 11 Arabidopsis thaliana 2E-101 506 35 57 0 (0) C
AT5G40405.2 11 Arabidopsis thaliana 3E-99 500 34 55 0 (0) _
Os03g52475.1 7 Oryza sativa 1E-94 278 47 69 0 (0) C
Os02g53050.1 7 Oryza sativa 2E-92 422 37 57 0 (0) _
Os10g26070.1 7 Oryza sativa 6E-92 480 34 53 0 (0) M
GRMZM2G130699_P01 3.21 Zea mays 6E-115 370 47 67 0 (0) M
Zm00001eb266810_P001 agpv5 Zea mays 6E-115 370 47 67 0 (0) M
v1_GRMZM2G130699_P01 4a53 Zea mays 6E-115 370 47 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) DYW_deaminase(1) PPR(8) PPR_1(7) PPR_2(6) PPR_3(7) PPR_long(4) TPR_14(4
TargetP:	Mitochondria (Class 4 C0.148; M0.517; S0.088; _0.042)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	504 aa (-cTP 484)
Molecular Weight	56.65 kDA(-cTP )
PI	6.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data