PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G28480.1   Oxoglutarate/iron-dependent oxygenase

Lab Annot.
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G28480.2 11Arabidopsis thaliana032495950 (0)S
AT3G28490.1 11Arabidopsis thaliana1E-16126481900 (0)S
AT5G18900.1 11Arabidopsis thaliana5E-12426662761 (1)S
Os10g27340.2 7Oryza sativa6E-14426868847 (7)M
Os03g58890.2 7Oryza sativa7E-13826866800 (0)S
Os03g58890.1 7Oryza sativa1E-13426866800 (0)S
v1_GRMZM2G520535_P01 4a53Zea mays9E-14627867830 (0)S
GRMZM2G520535_P01 3.21Zea mays9E-14627867830 (0)S
Zm00001eb048160_P001 agpv5Zea mays9E-14627867830 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) 2OG-FeII_Oxy_3(1) ShK(1)
TargetP: Secreted (Class 2 C0.229; M0.051; S0.855; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 316 aa (-cTP 252)
Molecular Weight 35.57 kDA(-cTP )
PI 6.32(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
17151019(vacuole - suspension cell)
19334764(plasma membrane (cell culture))
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help