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AT3G28460.1
methyltransferase
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| Lab Annot. |
RsmD - 16SrRNA methyltransferase
Mapman: 29.2.7* protein.synthesis.ribosome biogenesis |
| Curated Location |
plastid (Pubmed: 23198870 )
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
Cons_hypoth95(1) |
| TargetP: |
Chloroplast (Class 2 C0.806; M0.034; S0.080; _0.165) |
| Predotar: |
|
| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
314 aa (-cTP 267) |
| Molecular Weight |
34.81 kDA(-cTP 29.65) |
| PI |
9.24(-cTP 8.94) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 543 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >600 kDa (HMA) | wild-type |
| 640 | Detail | | | | | | | | leaf [A. thaliana] | plastid nucleoid | wild-type |
| 1178 | Detail | | | | | | | | leaf [A. thaliana] | co-IP RH3 stroma | clpr2-1 |
| 1179 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | clpr2-1 |
| 1196 | Detail | | | | | | | | leaf [A. thaliana] | co-IP RH3 stroma | clpr2-1 |
| 1197 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | clpr2-1 |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1411 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1425 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 2) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1454 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 2) |
| 1461 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 1) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1525 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1528 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1702 | Detail | | | | | | | | [A. thaliana] | | Col-0 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
20733066(phosphoproteome-ABA-leaf)
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Comparative Proteomics Data
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