PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G28020.1   DNA-binding protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48770.1 11Arabidopsis thaliana5E-7727156640 (0)C
AT3G48770.2 11Arabidopsis thaliana5E-7727156640 (0)C
Os11g31480.1 7Oryza sativa2E-4926942510 (0)M
Os11g31500.1 7Oryza sativa5E-4926841540 (0)_
Os12g29350.1 7Oryza sativa2E-4027236510 (0)M
Zm00001eb114050_P001 agpv5Zea mays7E-4826741530 (0)_
Zm00001eb114050_P002 agpv5Zea mays7E-4826741530 (0)_
GRMZM2G405804_P02 3.21Zea mays7E-4826741530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Gln-synt_C-ter(2)
TargetP: Cytoplasm (Class 2 C0.073; M0.128; S0.057; _0.882)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 246 aa (-cTP 244)
Molecular Weight 27.65 kDA(-cTP )
PI 6.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help