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AT3G27960.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G27960.3 11 Arabidopsis thaliana 0 663 100 100 0 (0) _
AT3G27960.2 11 Arabidopsis thaliana 0 594 100 100 0 (0) _
AT1G27500.2 11 Arabidopsis thaliana 0 634 55 72 0 (0) _
Os02g47880.2 7 Oryza sativa 0 688 59 73 16 (16) _
Os02g47880.1 7 Oryza sativa 0 688 59 73 16 (16) _
Os02g01960.1 7 Oryza sativa 0 545 55 73 11 (11) C
Zm00001eb252260_P002 agpv5 Zea mays 0 667 59 73 0 (0) _
GRMZM2G147377_P01 3.21 Zea mays 0 667 59 73 38 (6) _
v1_GRMZM2G147377_P02 4a53 Zea mays 0 599 59 72 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	14-3-3(2) DUF2225(2) DUF3856(5) DUF4810(1) Fis1_TPR_C(1) Foie-gras_1(3) MIT(4) P
TargetP:	Cytoplasm (Class 2 C0.180; M0.112; S0.062; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	663 aa (-cTP 646)
Molecular Weight	72.51 kDA(-cTP )
PI	5.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
872	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (1-8); k2k3 (9-10)
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data