PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G27880.1   hypothetical protein (DUF1645)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G23710.1 11Arabidopsis thaliana2E-2222733460 (0)_
AT1G70420.1 11Arabidopsis thaliana3E-1920933470 (0)_
AT5G14730.1 11Arabidopsis thaliana4E-1425930430 (0)_
Os05g49350.1 7Oryza sativa7E-2120431440 (0)_
Os05g49370.1 7Oryza sativa2E-1112933480 (0)M
Os01g47270.1 7Oryza sativa3E-1118930440 (0)_
GRMZM2G348890_P01 3.21Zea mays1E-1622730480 (0)_
v1_GRMZM2G348890_P01 4a53Zea mays1E-1622730480 (0)_
Zm00001eb296280_P001 agpv5Zea mays1E-1622730480 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1645(1)
TargetP: Cytoplasm (Class 1 C0.073; M0.079; S0.098; _0.925)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 242 aa (-cTP 199)
Molecular Weight 27.34 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
738Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help