|
AT3G27750.1
PPR containing protein
|
| Lab Annot. |
AtTHA8 - PPR protein - homologue of maize THA8
Mapman: 27.1.1 RNA.processing.splicing |
| Curated Location |
plastid (Pubmed: 23198870 )
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
HTH_24(1) |
| TargetP: |
Chloroplast (Class 4 C0.680; M0.339; S0.004; _0.069) |
| Predotar: |
|
| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
222 aa (-cTP 190) (-lTP 97) |
| Molecular Weight |
24.85 kDA(-cTP 21.32)(-lTP 10.87) |
| PI |
9.47(-cTP 8.59)(-lTP 5.213) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 326 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 342 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast low density membrane | wild-type |
| 873 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 877 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1411 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1454 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 2) |
| 1462 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 2) |
| 1482 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 1) |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
|
|
Comparative Proteomics Data
|
|
