PPDB

PPDB	The Plant Proteome Database

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AT3G27710.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34370.1 11 Arabidopsis thaliana 0 530 66 80 1 (1) _
AT2G16090.3 11 Arabidopsis thaliana 0 555 61 77 0 (0) _
AT2G16090.1 11 Arabidopsis thaliana 0 550 62 77 0 (0) _
Os03g13100.1 7 Oryza sativa 0 499 58 78 0 (0) _
Os03g42760.1 7 Oryza sativa 6E-145 519 44 62 0 (0) _
Os03g42780.1 7 Oryza sativa 1E-120 505 41 55 0 (0) _
Zm00001eb009370_P002 agpv5 Zea mays 0 489 58 77 0 (0) _
v1_GRMZM2G153611_P01 4a53 Zea mays 0 489 58 77 0 (0) _
Zm00001eb399570_P001 agpv5 Zea mays 0 489 58 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) OGG_N(1) zf-C3HC4(2) zf-C3HC4_2(3) zf-RING_2(3) zf-RING_4(4) zf-RING_UBOX
TargetP:	Cytoplasm (Class 1 C0.033; M0.091; S0.074; _0.955)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	537 aa (-cTP 511)
Molecular Weight	62.15 kDA(-cTP )
PI	5.22(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data