PPDB

 The Plant Proteome Database

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AT3G27660.1   oleosin 4
Lab Annot. oleosin 4 in oil bodies
Mapman: 11.4 lipid metabolism.TAG synthesis
Curated Location oil bodies (Pubmed: 21751352 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27660.2 11Arabidopsis thaliana4E-1381911001000 (0)_
AT5G40420.1 11Arabidopsis thaliana4E-61181647535 (27)_
AT3G01570.1 11Arabidopsis thaliana8E-57135627830 (23)_
Os04g46200.1 7Oryza sativa1E-1713534550 (0)_
Os03g49190.1 7Oryza sativa2E-1712748660 (0)_
AC206941.2_FGP002 3.21Zea mays5E-2512748650 (0)_
v1_AC206941.2_FGP002 4a53Zea mays5E-2512748650 (0)_
Zm00001eb216880_P001 agpv5Zea mays3E-2412748650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1206(2) DUF3487(1) Oleosin(1) Phage_holin_3_6(1) PrgI(1)
TargetP: Cytoplasm (Class 3 C0.017; M0.381; S0.020; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 191 aa (-cTP 118)
Molecular Weight 20.31 kDA(-cTP )
PI 6.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2236Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2256Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to seeds)
19562800(oil body mature seeds (Brassica napus))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help