PPDB

 The Plant Proteome Database

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AT3G27640.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27640.2 11Arabidopsis thaliana05161001000 (0)_
AT2G43770.1 11Arabidopsis thaliana2E-1627226414 (2)C
AT1G10580.1 11Arabidopsis thaliana1E-1429523391 (1)_
Os03g49200.1 7Oryza sativa3E-14252544620 (0)M
Os03g49200.2 7Oryza sativa3E-12039448660 (0)M
Os06g44370.1 7Oryza sativa8E-1627325430 (0)C
v1_GRMZM2G300945_P01 4a53Zea mays4E-14552346640 (0)M
Zm00001eb216890_P003 agpv5Zea mays4E-14552346640 (0)M
GRMZM2G300945_P01 3.21Zea mays4E-14552346640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(4) Ge1_WD40(5) Nup160(3) WD40(7) WD40_3(3)
TargetP: Chloroplast (Class 5 C0.474; M0.357; S0.005; _0.272)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 535 aa (-cTP 515)
Molecular Weight 59.40 kDA(-cTP 57.07)
PI 8.48(-cTP 8.37)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help