PPDB

PPDB	The Plant Proteome Database

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AT3G27530.1 golgin Putative 6

Lab Annot.

GC6 (GOLGIN CANDIDATE 6); binding / protein transporter
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os12g35360.1 7 Oryza sativa 0 900 58 78 24 (24) _
Os09g04960.1 7 Oryza sativa 2E-13 98 40 59 0 (0) _
GRMZM2G174803_P01 3.21 Zea mays 0 690 47 64 5 (5) _
Zm00001eb410430_P004 agpv5 Zea mays 0 918 55 76 0 (0) _
Zm00001eb410430_P002 agpv5 Zea mays 0 918 53 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DivIC(3) DUF3361(3) NLRC4_HD2(1) SAT(2) Uso1_p115_C(1) Uso1_p115_head(3) V-ATPas
TargetP:	Cytoplasm (Class 3 C0.130; M0.156; S0.045; _0.669)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	914 aa (-cTP 903)
Molecular Weight	101.83 kDA(-cTP )
PI	4.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1547	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1550	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1552	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1555	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1556	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1568	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1572	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1574	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1578	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1580	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data