PPDB

PPDB	The Plant Proteome Database

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AT3G27390.1 transmembrane protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G27390.2 11 Arabidopsis thaliana 0 588 100 100 0 (0) S
AT5G40640.1 11 Arabidopsis thaliana 0 590 75 85 1 (1) S
AT4G12680.1 11 Arabidopsis thaliana 1E-146 543 46 63 1 (1) S
Os04g40700.1 7 Oryza sativa 0 600 52 69 0 (0) S
Os04g40700.3 7 Oryza sativa 0 600 52 69 0 (0) S
Os04g40700.2 7 Oryza sativa 0 600 52 69 0 (0) S
Zm00001eb246250_P001 agpv5 Zea mays 0 582 50 68 0 (0) S
Zm00001eb079310_P001 agpv5 Zea mays 0 587 53 69 0 (0) S
Zm00001eb079310_P004 agpv5 Zea mays 0 587 53 69 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Transgly_assoc(2)
TargetP:	Secreted (Class 2 C0.000; M0.090; S0.929; _0.284)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	5 TMs
TAT position:
Length	588 aa (-cTP 547)
Molecular Weight	65.50 kDA(-cTP )
PI	8.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data