PPDB

PPDB	The Plant Proteome Database

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AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40720.1 11 Arabidopsis thaliana 0 583 72 80 0 (0) M
AT5G40720.3 11 Arabidopsis thaliana 0 583 72 80 0 (0) M
AT5G40720.2 11 Arabidopsis thaliana 0 583 72 80 0 (0) M
Os08g02850.1 7 Oryza sativa 5E-176 539 49 65 0 (0) _
Os06g51210.1 7 Oryza sativa 4E-83 530 34 49 0 (0) M
Os12g16690.1 7 Oryza sativa 4E-62 363 41 55 0 (0) C
Zm00001eb173440_P001 agpv5 Zea mays 1E-165 535 49 64 0 (0) _
GRMZM2G049185_P01 3.21 Zea mays 1E-165 535 49 64 0 (0) _
v1_GRMZM2G049185_P02 4a53 Zea mays 1E-165 535 49 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_tranf_2_4(1) Glyco_transf_92(1) lci(1) Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4
TargetP:	Mitochondria (Class 4 C0.005; M0.432; S0.058; _0.153)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	913 aa (-cTP 852)
Molecular Weight	104.14 kDA(-cTP )
PI	9.55(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data