PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G27310.1   plant UBX domain-containing protein 1

Lab Annot. PUX1 (PLANT UBX DOMAIN-CONTAINING PROTEIN 1)
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: soluble fraction15498773
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01650.2 11Arabidopsis thaliana3E-0614030460 (0)C
AT2G01650.1 11Arabidopsis thaliana3E-0614030462 (0)C
Os04g40870.1 7Oryza sativa2E-6423447640 (0)_
Zm00001eb079230_P001 agpv5Zea mays3E-6424549660 (0)_
GRMZM2G461557_P04 3.21Zea mays1E-6323051688 (0)_
Zm00001eb425170_P001 agpv5Zea mays1E-6323051680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UBX(2)
TargetP: Cytoplasm (Class 4 C0.115; M0.327; S0.012; _0.715)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 251 aa (-cTP 232)
Molecular Weight 28.50 kDA(-cTP )
PI 6.27(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help