PPDB

 The Plant Proteome Database

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AT3G27280.1   prohibitin 4
Lab Annot. prohibitin, putative
Mapman: 35.1 not assigned.no ontology
Curated Location mitochondria (Pubmed: 17883375 )

TAIR curated location: mitochondrion & cell wall (sensu Magnoliophyta)14671022,11743115,16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27280.2 11Arabidopsis thaliana027910010073 (59)S
AT5G40770.1 11Arabidopsis thaliana02768994234 (207)S
AT5G14300.1 11Arabidopsis thaliana4E-11424965790 (0)S
Os02g37000.1 7Oryza sativa8E-15028073860 (0)S
Os04g38900.1 7Oryza sativa2E-132281728317 (17)S
Os04g38900.2 7Oryza sativa2E-132281728337 (37)S
v1_GRMZM2G410710_P01 4a53Zea mays4E-14728072851 (0)S
v1_GRMZM2G410710_P04 4a53Zea mays4E-14728072851 (0)S
Zm00001eb245230_P002 agpv5Zea mays4E-14728072850 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Band_7(1) YdfA_immunity(1)
TargetP: Secreted (Class 1 C0.024; M0.039; S0.944; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 279 aa (-cTP 255)
Molecular Weight 30.64 kDA(-cTP )
PI 6.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1596Detail        [A. thaliana]  
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1619Detail        [A. thaliana] m48
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1695Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1697Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1699Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1712Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1714Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1716Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1744Detail        [A. thaliana] Mep-6
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
MitoDB(Mitochondrial proteome)
15060130(Plasma Membrane proteome)
15276431(Mitochondrial proteome)
15539469(vacuole)
15276431(mitochondrial membranes-suspension cells)
17151019(vacuole - suspension cell)
19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help