PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G27220.1   Galactose oxidase/kelch repeat superfamily protein

Lab Annot. kelch repeat-containing protein
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G51540.1 11Arabidopsis thaliana041063790 (0)S
Os04g41020.1 7Oryza sativa040964780 (0)M
Os08g03420.2 7Oryza sativa036767800 (0)S
Os08g03420.3 7Oryza sativa036767800 (0)S
GRMZM2G030598_P03 3.21Zea mays039862770 (0)S
v1_GRMZM2G030598_P03 4a53Zea mays039862770 (0)S
Zm00001eb079150_P001 agpv5Zea mays040962770 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4096(1) Kelch_1(4) Kelch_2(5) Kelch_3(4) Kelch_4(4) Kelch_5(5) Kelch_6(6) PQQ
TargetP: Mitochondria (Class 5 C0.046; M0.528; S0.020; _0.412)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 426 aa (-cTP 381)
Molecular Weight 48.50 kDA(-cTP )
PI 9.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help