PPDB

 The Plant Proteome Database

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AT3G27160.1   Ribosomal protein S21 family protein
Lab Annot. 30S ribosomal protein S21 (GSH1)
Mapman: 29.2.1.1.3.1.21 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21
Curated Location plastid ribosome (Pubmed: 23198870 15215513 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27160.2 11Arabidopsis thaliana4E-1301801001000 (0)C
AT5G63300.1 11Arabidopsis thaliana2E-2716240610 (0)C
AT5G63300.2 11Arabidopsis thaliana1E-1912143630 (0)C
Os02g09590.1 7Oryza sativa3E-19112406339 (39)C
Os08g02840.1 7Oryza sativa6E-0810038620 (0)C
Zm00001eb234790_P001 agpv5Zea mays2E-2310351690 (0)C
v1_GRMZM2G076263_P01 4a53Zea mays2E-23103516916 (16)C
GRMZM2G076263_P01 3.21Zea mays2E-23103516928 (27)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Presenilin(1) Ribosomal_S21(1)
TargetP: Chloroplast (Class 1 C0.966; M0.024; S0.023; _0.029)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 183 aa (-cTP 136)
Molecular Weight 20.91 kDA(-cTP 15.74)
PI 9.44(-cTP 8.92)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1175Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1177Detail       leaf [A. thaliana] co-IP OEC23 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1180Detail       leaf [A. thaliana] co-IP OEC23 stromaclpr2-1
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1197Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1199Detail       leaf [A. thaliana] co-IP OEC23 stromaclpr2-1
1214Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1215Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1292Detail       leaf [A. thaliana] co-IP cGEP (rep. 1) stromawild-type
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1568Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1640Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1690Detail        [A. thaliana]  
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1870Detail       Total leaf [A. thaliana] Stroma wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1999Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2000Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2060Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2064Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2065Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2072Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2081Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2084Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2085Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2086Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2121Detail       leaf [A. thaliana] Stroma stromacGep
2130Detail       leaf [A. thaliana] Stroma stromawild-type
2141Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2142Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2242Detail       seedlings [A. thaliana] total tissue gfs9
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
19376835(leaf phosphoproteins)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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