PPDB

 The Plant Proteome Database

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AT3G27110.1   Peptidase family M48 family protein
Lab Annot. Plastoglobular M48 protease (PGM48)
Mapman: 29.5.7.2.5* protein.degradation.metalloprotease.MA(M).M48
Curated Location plastoglobules (Pubmed: 23198870 22274653 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27110.2 11Arabidopsis thaliana0344100100237 (222)C
AT3G27110.5 11Arabidopsis thaliana03001001000 (0)C
AT3G27110.3 11Arabidopsis thaliana02561001000 (0)C
Os01g73910.2 7Oryza sativa5E-16428278906 (6)C
Os01g73910.3 7Oryza sativa3E-15928276896 (6)C
Os01g73910.1 7Oryza sativa4E-14325777892 (2)C
v1_GRMZM2G111200_P01 4a53Zea mays2E-16426582932 (2)C
v1_GRMZM2G111200_P03 4a53Zea mays2E-16426582932 (2)C
GRMZM2G111200_P01 3.21Zea mays2E-16426582933 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Peptidase_M48(1) Peptidase_M56(1)
TargetP: Chloroplast (Class 2 C0.767; M0.082; S0.122; _0.082)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 344 aa (-cTP 297) (-lTP 207)
Molecular Weight 37.95 kDA(-cTP 32.95)(-lTP 22.96)
PI 9.13(-cTP 8.34)(-lTP 8.465)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
484Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
670Detail       leaf [A. thaliana] chloroplast plastoglobulek2 (rep. 2-1)
671Detail       leaf [A. thaliana] chloroplast plastoglobulek2 (rep. 3-1)
688Detail       leaf [A. thaliana] chloroplast plastoglobulek2 (rep. 3-2)
693Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 2-2)
694Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3-2)
773Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 2 - 5 ug)
774Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 2- 10 ug)
775Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3 - 5 ug)
776Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3 - 10 ug)
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1124Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1372Detail       Total leaf 5d ML stress [A. thaliana] chloroplast plastoglobulewild-type
1513Detail       leaf [A. thaliana] wild-type
1514Detail       leaf [A. thaliana] wild-type
1515Detail       leaf [A. thaliana] wild-type
1516Detail       leaf [A. thaliana] wild-type
1517Detail       leaf [A. thaliana] wild-type
1518Detail       leaf [A. thaliana] wild-type
1520Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1522Detail       leaf [A. thaliana] wild-type
1523Detail       leaf [A. thaliana] wild-type
1524Detail       leaf [A. thaliana] wild-type
1526Detail       leaf [A. thaliana] co-IP GST-ClpS 100ug bait stromaclpc1 x clps (rep. 2)
1527Detail       leaf [A. thaliana] co-IP GST-ClpS 10ug bait stromaclpc1 x clps (rep. 2)
1535Detail       leaf [A. thaliana] wild-type
1536Detail       leaf [A. thaliana] wild-type
1542Detail       leaf [A. thaliana] wild-type
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
1650Detail       leaf [A. thaliana] plastoglobules plastoglobulem48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1687Detail        [A. thaliana]  
1723Detail        [A. thaliana]  
1724Detail        [A. thaliana]  
1726Detail        [A. thaliana]  
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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