PPDB

PPDB	The Plant Proteome Database

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AT3G27080.1 translocase of outer membrane 20 kDa subunit 3

Lab Annot.

mitochondrial import receptor subunit TOM20-3
Mapman: 29.3.2 protein.targeting.mitochondria

Curated Location

TAIR curated location: mitochondrial outer membrane & mitochondrion & mitochondrial inner membrane & mitochondrial outer membrane translocase complex & mitochondrial inner membrane presequence translocase complex14730085,11161051

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G27070.1 11 Arabidopsis thaliana 2E-77 187 63 74 0 (0) _
AT5G40930.1 11 Arabidopsis thaliana 2E-69 199 54 68 8 (8) _
AT1G27390.1 11 Arabidopsis thaliana 7E-63 204 46 67 34 (24) _
Os01g69250.1 7 Oryza sativa 2E-56 202 44 62 32 (32) _
Os01g69250.2 7 Oryza sativa 4E-42 135 50 71 32 (32) _
Os01g69250.4 7 Oryza sativa 7E-32 107 51 70 4 (4) _
Zm00001eb364380_P001 agpv5 Zea mays 3E-58 197 45 64 0 (0) _
GRMZM2G100402_P01 3.21 Zea mays 3E-58 197 45 64 13 (13) _
v1_GRMZM2G100402_P01 4a53 Zea mays 3E-58 197 45 64 10 (9) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	TOM20_plant(1) TPR_1(2) TPR_11(2) TPR_14(2) TPR_19(2) TPR_2(2)
TargetP:	Cytoplasm (Class 1 C0.111; M0.069; S0.081; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	202 aa (-cTP 185)
Molecular Weight	22.57 kDA(-cTP )
PI	4.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21515685(GreenCut2)

Comparative Proteomics Data