PPDB

PPDB	The Plant Proteome Database

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AT3G26630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42920.2 11 Arabidopsis thaliana 4E-92 393 38 59 0 (0) C
AT2G42920.1 11 Arabidopsis thaliana 4E-92 393 38 59 0 (0) C
AT4G18840.2 11 Arabidopsis thaliana 1E-90 440 36 55 0 (0) _
Os05g36350.1 7 Oryza sativa 1E-93 395 34 58 0 (0) C
Os10g26070.1 7 Oryza sativa 9E-80 420 35 52 0 (0) M
Os02g40750.1 7 Oryza sativa 3E-77 419 33 52 0 (0) _
Zm00001eb076830_P001 agpv5 Zea mays 5E-92 437 33 57 0 (0) M
GRMZM2G474929_P02 3.21 Zea mays 5E-92 437 33 57 0 (0) M
v1_GRMZM2G423538_P01 4a53 Zea mays 5E-84 426 32 53 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) MRP-S27(2) PPR(8) PPR_1(8) PPR_2(7) PPR_3(6) PPR_long(3) TPR_14(3)
TargetP:	Chloroplast (Class 3 C0.583; M0.084; S0.045; _0.178)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	455 aa (-cTP 436)
Molecular Weight	51.22 kDA(-cTP 49.28)
PI	6.08(-cTP 5.95)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1197	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data