PPDB

PPDB	The Plant Proteome Database

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AT3G26618.1 eukaryotic release factor 1-3

Lab Annot.

eukaryotic release factor 1 protein / eRF1 protein
Mapman: 29.2.5 protein.synthesis.release

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12920.1 11 Arabidopsis thaliana 0 432 94 97 41 (19) _
AT5G47880.1 11 Arabidopsis thaliana 0 434 86 92 12 (6) _
AT5G47880.2 11 Arabidopsis thaliana 0 434 86 92 12 (6) _
Os03g49580.1 7 Oryza sativa 0 437 90 95 1 (1) _
Os07g39870.2 7 Oryza sativa 0 437 89 95 14 (14) _
Os07g39870.3 7 Oryza sativa 0 437 89 95 14 (14) _
Zm00001eb108120_P001 agpv5 Zea mays 0 427 90 96 0 (0) _
v1_GRMZM2G090274_P02 4a53 Zea mays 0 427 90 96 33 (33) _
v1_GRMZM2G090274_P01 4a53 Zea mays 0 427 90 96 33 (33) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	acVLRF1(1) baeRF_family10(1) eRF1_1(1) eRF1_2(1) eRF1_3(1) Ribosomal_L7Ae(1)
TargetP:	Cytoplasm (Class 2 C0.142; M0.167; S0.036; _0.835)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	435 aa (-cTP 365)
Molecular Weight	49.01 kDA(-cTP )
PI	5.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
1018	Detail								[aphid]
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1549	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2300	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data