PPDB

PPDB	The Plant Proteome Database

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AT3G26610.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G60590.1 11 Arabidopsis thaliana 4E-132 401 49 64 0 (0) M
AT5G14650.1 11 Arabidopsis thaliana 2E-131 379 50 67 0 (0) S
AT1G10640.1 11 Arabidopsis thaliana 2E-129 399 47 64 0 (0) M
Os01g44970.1 7 Oryza sativa 3E-134 384 51 69 0 (0) S
Os01g36830.1 7 Oryza sativa 6E-126 409 47 63 0 (0) S
Os01g45060.1 7 Oryza sativa 3E-118 321 52 71 0 (0) M
Zm00001eb356620_P002 agpv5 Zea mays 9E-150 415 50 71 0 (0) S
GRMZM2G338158_P01 3.21 Zea mays 7E-148 425 50 70 0 (0) S
Zm00001eb356620_P001 agpv5 Zea mays 2E-144 440 47 67 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(2) Glyco_hydro_28(1) NosD(2) Pectate_lyase_3(1)
TargetP:	Secreted (Class 1 C0.073; M0.006; S0.925; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	470 aa (-cTP 399)
Molecular Weight	51.08 kDA(-cTP )
PI	9.36(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data