PPDB

The Plant Proteome Database

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AT3G26610.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60590.1 11Arabidopsis thaliana4E-13240149640 (0)M
AT5G14650.1 11Arabidopsis thaliana2E-13137950670 (0)S
AT1G10640.1 11Arabidopsis thaliana2E-12939947640 (0)M
Os01g44970.1 7Oryza sativa3E-13438451690 (0)S
Os01g36830.1 7Oryza sativa6E-12640947630 (0)S
Os01g45060.1 7Oryza sativa3E-11832152710 (0)M
Zm00001eb356620_P002 agpv5Zea mays9E-15041550710 (0)S
GRMZM2G338158_P01 3.21Zea mays7E-14842550700 (0)S
Zm00001eb356620_P001 agpv5Zea mays2E-14444047670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Beta_helix(2) Glyco_hydro_28(1) NosD(2) Pectate_lyase_3(1)
TargetP: Secreted (Class 1 C0.073; M0.006; S0.925; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 470 aa (-cTP 399)
Molecular Weight 51.08 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help