PPDB

PPDB	The Plant Proteome Database

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AT3G26560.1 ATP-dependent RNA helicase

Lab Annot.

ATP-dependent RNA helicase
Mapman: 27.1 RNA.processing

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G32490.2 11 Arabidopsis thaliana 0 655 56 76 2 (2) S
AT1G32490.1 11 Arabidopsis thaliana 0 655 56 76 2 (2) S
AT2G35340.1 11 Arabidopsis thaliana 0 645 55 75 0 (0) S
Os02g19860.1 7 Oryza sativa 0 967 88 94 5 (5) _
Os06g23530.1 7 Oryza sativa 0 965 76 87 0 (0) M
Os08g24760.1 7 Oryza sativa 0 633 58 77 1 (1) _
Zm00001eb236680_P002 agpv5 Zea mays 0 1051 84 90 0 (0) _
v1_GRMZM2G029258_P01 4a53 Zea mays 0 1051 84 90 19 (19) _
GRMZM2G029258_P01 3.21 Zea mays 0 1051 84 90 4 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_14(1) AAA_16(1) AAA_19(1) AAA_22(1) AAA_23(3) AAA_30(1) ABC_tran(1) D
TargetP:	Cytoplasm (Class 3 C0.082; M0.106; S0.305; _0.768)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1168 aa (-cTP 1149)
Molecular Weight	134.16 kDA(-cTP )
PI	6.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data