PPDB

 The Plant Proteome Database

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AT3G26540.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53360.1 11Arabidopsis thaliana5E-9863129500 (0)M
AT3G53360.2 11Arabidopsis thaliana5E-9863129500 (0)M
AT4G21300.1 11Arabidopsis thaliana8E-9459930510 (0)C
Os04g35650.1 7Oryza sativa065543610 (0)C
Os03g56850.1 7Oryza sativa2E-9863928510 (0)M
Os12g36620.1 7Oryza sativa3E-9864330510 (0)_
GRMZM2G341216_P01 3.21Zea mays068942590 (0)C
v1_GRMZM2G341216_P01 4a53Zea mays068942590 (0)C
Zm00001eb422990_P001 agpv5Zea mays2E-17158343610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATP13(3) PPR(13) PPR_1(13) PPR_2(13) PPR_3(7) PPR_long(3)
TargetP: Cytoplasm (Class 3 C0.123; M0.241; S0.017; _0.663)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 700 aa (-cTP 621)
Molecular Weight 79.19 kDA(-cTP )
PI 7.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help